10.24475/bma.2799
Atlas
Alexander
Woodward 0000-0003-3068-1401 Neuroinformatics Japan Center, RIKEN Brain Science Institute
Brain/MINDS 3D Marmoset Reference Brain Atlas 2017
Connectome Analysis Unit, Integrative Computational Brain Science Collaboration Division, RIKEN Center for Brain Science
JPN
2017
2020-04-22
Tsutomu
Hashikawa Neuroinformatics Japan Center, RIKEN Brain Science Institute
Laboratory for Symbolic Cognitive Development, RIKEN Brain Science Institute
Masahide
Maeda Neuroinformatics Japan Center, RIKEN Brain Science Institute
Takaaki
Kaneko Laboratory for Marmoset Neural Architecture, RIKEN Brain Science Institute
Keigo
Hikishima 0000-0003-1133-1297 Animal Resources Section, Okinawa Institute of Science and Technology Graduate University
Atsushi
Iriki Laboratory for Symbolic Cognitive Development, RIKEN Brain Science Institute
Hideyuki
Okano 0000-0001-7482-5935 Laboratory for Marmoset Neural Architecture, RIKEN Brain Science Institute
Yoko
Yamaguchi Neuroinformatics Japan Center, RIKEN Brain Science Institute
1.1
NIfTI-1
en
103.35 MB
Creative Commons Attribution 4.0 International (CC BY 4.0)
The dataset includes NIfTI files of MRI T2 ex-vivo data; reconstructed Nissl stained images of the same brain, registered to the shape of the MRI; brain region segmentation (with separate color lookup table); and gray, mid-cortical and white matter boundary segmentation. In addition, a 3D Slicer scene file is provided that can be used for testing the dataset within the freely downloadable 3D Slicer software ([https://www.slicer.org/](https://www.slicer.org/)). The scene file can be dragged directly into 3D Slicer and the atlas can be used immediately. Files can be downloaded individually or as one zip file.
</br>The atlas can be viewed online via the Zooming Atlas Viewer (ZAV) by clicking [here](https://www.bminds.brain.riken.jp/ZAViewer_Reference_Brain/).
Japan Agency for Medical Research and Development (AMED)
https://doi.org/10.13039/100009619